Methods Module

The methods module contains functions for processing tomography data.

• Hyperexplorer Module
  • HyperSliceExplorer
  • ImageSpectrumFitGUI
  • ImageSpectrumGUI
  • InteractiveHyperProfileExtraction
  • InteractiveProfileExtraction
  • bresenham()
  • chemimexplorer
• Metrics Module
  • Rexp()
  • Rwp()
  • calculate_rmse()
  • chi_square()
  • compute_goodness_of_fit()
  • mae()
  • mse()
  • normalized_cross_correlation()
  • psnr()
  • ssim_data()
  • total_variation_image()
  • total_variation_volume()
• Noise Module
  • addpnoise1D()
  • addpnoise2D()
  • addpnoise3D()
• Plots Module
  • closefigs()
  • create_complist_imgs()
  • create_complist_spectra()
  • nDTomo_colormap()
  • plotfigs_imgs()
  • plotfigs_spectra()
  • showim()
  • showplot()
  • showspectra()
• X-rays Module
  • AngtoKeV()
  • KeVtoAng()
  • q2tth()
  • simulate_synchrotron_intensity()
  • tth2q()
• Zip Compression Module
  • seven_zip_file()
  • seven_zip_folder()
  • seven_zip_folder_split()
  • zip_all_files_with_extension()
  • zip_by_extension()
  • zip_each_file_with_extension()
  • zip_file_list()
  • zip_with_7z()
• Miscellaneous Module
  • calculate_center_of_mass()
  • cart2pol()
  • cart2polim()
  • cirmask()
  • compare_spectra()
  • create_circle()
  • create_cirmask()
  • crop_ctimage()
  • crop_ctvolume()
  • crop_image()
  • crop_volume()
  • crop_volume_getinds()
  • even_idx()
  • fill_2d_binary()
  • find_first_neighbors_2D()
  • fit_shape_to_points()
  • image_segm()
  • interpvol()
  • make_matrix_even()
  • mask_thr()
  • maskvolume()
  • nan_to_number()
  • ndtomopath()
  • normvol()
  • number_to_nan()
  • odd_idx()
  • pad_zeros()
  • pad_zeros_svol()
  • pad_zeros_vol()
  • pol2cart()
  • pol2cartim()
  • rebin1d()
  • rebinmat()
  • rgb2gray()
  • translate_xy()