Index

A

about() (nDTomo.gui.nDTomoGUI.nDTomoGUI method), [1] add_norm_layer() (nDTomo.pytorch.models_torch.CNN1D method) (nDTomo.pytorch.models_torch.CNN2D method) (nDTomo.pytorch.models_torch.CNN3D method) (nDTomo.pytorch.models_torch.ResNet2D method) (nDTomo.pytorch.models_torch.ResNetBlock method) addpnoise1D() (in module nDTomo.methods.noise) addpnoise2D() (in module nDTomo.methods.noise) addpnoise3D() (in module nDTomo.methods.noise) airrem() (in module nDTomo.tomo.sinograms) Amatrix_rec() (in module nDTomo.pytorch.tomo_torch) Amatrix_sino() (in module nDTomo.pytorch.tomo_torch) Amatrix_torch() (in module nDTomo.pytorch.tomo_torch)

AngtoKeV() (in module nDTomo.methods.xrays) append_file() (nDTomo.gui.nDTomoGUI.nDTomoGUI method), [1] astra_Amatrix() (in module nDTomo.tomo.astra_tomo) astra_create_geo() (in module nDTomo.tomo.astra_tomo) astra_create_sino() (in module nDTomo.tomo.astra_tomo) astra_create_sino_geo() (in module nDTomo.tomo.astra_tomo) astra_create_sinostack() (in module nDTomo.tomo.astra_tomo) astra_rec_2vols() (in module nDTomo.tomo.astra_tomo) astra_rec_alg() (in module nDTomo.tomo.astra_tomo) astra_rec_single() (in module nDTomo.tomo.astra_tomo) astra_rec_vol() (in module nDTomo.tomo.astra_tomo) astra_rec_vol_singlesino() (in module nDTomo.tomo.astra_tomo) atand() (in module nDTomo.analysis.peaks) azimint() (nDTomo.sim.xrdct.nDVAcq method)

B

back_project_3D() (in module nDTomo.pytorch.tomo_torch) backproject() (in module nDTomo.tomo.conv_tomo) batchfit() (nDTomo.gui.nDTomoGUI.FitData method), [1]

batchpeakfit() (nDTomo.gui.nDTomoGUI.nDTomoGUI method), [1] bresenham() (in module nDTomo.methods.hyperexpl) build_affine_matrix() (in module nDTomo.pytorch.reg_torch) build_affine_matrix_3d() (in module nDTomo.pytorch.reg_torch)

C

Cagliotti() (in module nDTomo.analysis.peaks) CagliottiLS() (in module nDTomo.analysis.peaks) calc_patches_indices() (in module nDTomo.pytorch.utils_torch) calcbeamcentre() (nDTomo.sim.xrdct.nDVAcq method) calculate_center_of_mass() (in module nDTomo.methods.misc) calculate_rmse() (in module nDTomo.methods.metrics) cart2pol() (in module nDTomo.methods.misc) cart2polim() (in module nDTomo.methods.misc) cgls() (in module nDTomo.tomo.conv_tomo) cgls_functional() (in module nDTomo.tomo.conv_tomo) cgls_pytorch_functional() (in module nDTomo.pytorch.tomo_torch) changecolormap() (nDTomo.gui.nDTomoGUI.nDTomoGUI method), [1] channel_final() (nDTomo.gui.nDTomoGUI.nDTomoGUI method), [1] channel_initial() (nDTomo.gui.nDTomoGUI.nDTomoGUI method), [1] chebyshev_polynomial() (in module nDTomo.pytorch.peak_models_torch) check_and_transpose() (nDTomo.gui.nDTomoGUI.nDTomoGUI method), [1] chemimexplorer (class in nDTomo.methods.hyperexpl) chi_square() (in module nDTomo.methods.metrics) cirmask() (in module nDTomo.methods.misc) clear_profile() (nDTomo.methods.hyperexpl.InteractiveHyperProfileExtraction method) (nDTomo.methods.hyperexpl.InteractiveProfileExtraction method) closeEvent() (nDTomo.gui.nDTomoGUI.nDTomoGUI method), [1] closefigs() (in module nDTomo.methods.plots) cmap (nDTomo.gui.nDTomoGUI.nDTomoGUI attribute), [1] CNN1D (class in nDTomo.pytorch.models_torch) CNN2D (class in nDTomo.pytorch.models_torch) CNN3D (class in nDTomo.pytorch.models_torch) CombGaussians() (in module nDTomo.analysis.peaks) CombGaussiansLS() (in module nDTomo.analysis.peaks) CombGaussiansLSq() (in module nDTomo.analysis.peaks) CombGaussiansq() (in module nDTomo.analysis.peaks) compare_spectra() (in module nDTomo.methods.misc) compute_goodness_of_fit() (in module nDTomo.methods.metrics) compute_W_ray() (in module nDTomo.pytorch.tomo_torch) ConeBeamCTbeam() (in module nDTomo.tomo.astra_tomo) ConeBeamCTGeometry() (in module nDTomo.tomo.astra_tomo) coneBeamFDK() (in module nDTomo.tomo.astra_tomo) coneBeamFP() (in module nDTomo.tomo.astra_tomo) coneBeamFP_FDK() (in module nDTomo.tomo.astra_tomo)

continuous_rot_trans() (in module nDTomo.sim.pencilbeam) continuous_rot_trans_optimised() (in module nDTomo.sim.pencilbeam) conv1Dto2D() (nDTomo.sim.xrdct.nDVAcq method) ConvBlock (class in nDTomo.pytorch.models_torch) correct_sick_pixels_image() (in module nDTomo.tomo.sinograms) create_3D_window() (nDTomo.pytorch.utils_torch.SSIM3DLoss method) create_Amat() (in module nDTomo.tomo.astra_tomo) create_circle() (in module nDTomo.methods.misc) (in module nDTomo.sim.shapes2D) create_cirmask() (in module nDTomo.methods.misc) create_complist_imgs() (in module nDTomo.methods.plots) create_complist_spectra() (in module nDTomo.methods.plots) create_cone() (in module nDTomo.sim.shapes3D) create_cube() (in module nDTomo.sim.shapes3D) create_cuboid() (in module nDTomo.sim.shapes3D) create_cylinder() (in module nDTomo.sim.shapes3D) create_ellipse() (in module nDTomo.sim.shapes2D) create_ellipsoid() (in module nDTomo.sim.shapes3D) create_equilateral_triangle() (in module nDTomo.sim.shapes2D) create_hexagonal_prism() (in module nDTomo.sim.shapes3D) create_menger_sponge() (in module nDTomo.sim.shapes3D) create_mobius_strip() (in module nDTomo.sim.shapes3D) create_phantom() (nDTomo.gui.nDTomoGUI.nDTomoGUI method), [1] create_polygon() (in module nDTomo.sim.shapes2D) create_pyramid() (in module nDTomo.sim.shapes3D) create_rectangle() (in module nDTomo.sim.shapes2D) create_sphere() (in module nDTomo.sim.shapes3D) create_star() (in module nDTomo.sim.shapes2D) create_torch_Amat() (in module nDTomo.pytorch.tomo_torch) create_torus() (in module nDTomo.sim.shapes3D) create_triangle() (in module nDTomo.sim.shapes2D) create_voronoi() (in module nDTomo.sim.shapes2D) create_voronoi_3d() (in module nDTomo.sim.shapes3D) create_window() (nDTomo.pytorch.utils_torch.SSIM2D method) Crop2D (class in nDTomo.pytorch.models_torch) crop_ctimage() (in module nDTomo.methods.misc) crop_ctvolume() (in module nDTomo.methods.misc) crop_image() (in module nDTomo.methods.misc) crop_volume() (in module nDTomo.methods.misc) crop_volume_getinds() (in module nDTomo.methods.misc)

D

dcircles() (in module nDTomo.sim.phantoms) denormalize() (in module nDTomo.pytorch.utils_torch) doniach_sunjic_peak() (in module nDTomo.pytorch.peak_models_torch)

DownBlock (class in nDTomo.pytorch.models_torch) draw_valid_indices() (in module nDTomo.pytorch.utils_torch) dummy() (in module nDTomo.tomo.astra_tomo)

E

even_idx() (in module nDTomo.methods.misc) explore() (nDTomo.gui.nDTomoGUI.nDTomoGUI method), [1] (nDTomo.methods.hyperexpl.HyperSliceExplorer method) exponential_power_peak() (in module nDTomo.pytorch.peak_models_torch) export_roi_image() (nDTomo.gui.nDTomoGUI.nDTomoGUI method), [1]

export_roi_pattern() (nDTomo.gui.nDTomoGUI.nDTomoGUI method), [1] exportdp() (nDTomo.gui.nDTomoGUI.nDTomoGUI method), [1] exportim() (nDTomo.gui.nDTomoGUI.nDTomoGUI method), [1] extract_intensity_profile() (nDTomo.methods.hyperexpl.InteractiveHyperProfileExtraction method) (nDTomo.methods.hyperexpl.InteractiveProfileExtraction method)

F

face() (in module nDTomo.sim.phantoms) fbpvol() (in module nDTomo.tomo.conv_tomo) FileDialog (class in nDTomo.gui.nDTomoGUI) fileOpen() (nDTomo.gui.nDTomoGUI.nDTomoGUI method), [1] fileQuit() (nDTomo.gui.nDTomoGUI.nDTomoGUI method), [1] fill_2d_binary() (in module nDTomo.methods.misc) filter_patch_indices() (in module nDTomo.pytorch.utils_torch) filter_sinogram() (in module nDTomo.tomo.conv_tomo) find_first_neighbors_2D() (in module nDTomo.methods.misc) fit_gaussian_map() (in module nDTomo.analysis.peaks) fit_shape_to_points() (in module nDTomo.methods.misc) FitData (class in nDTomo.gui.nDTomoGUI), [1] fitdone (nDTomo.gui.nDTomoGUI.FitData attribute), [1] forward() (nDTomo.pytorch.models_torch.CNN1D method) (nDTomo.pytorch.models_torch.CNN2D method) (nDTomo.pytorch.models_torch.CNN3D method) (nDTomo.pytorch.models_torch.ConvBlock method) (nDTomo.pytorch.models_torch.Crop2D method) (nDTomo.pytorch.models_torch.DownBlock method) (nDTomo.pytorch.models_torch.PeakFitCNN method) (nDTomo.pytorch.models_torch.PeakModel method) (nDTomo.pytorch.models_torch.PrmCNN2D method) (nDTomo.pytorch.models_torch.ResNet2D method) (nDTomo.pytorch.models_torch.ResNetBlock method) (nDTomo.pytorch.models_torch.SD2I method) (nDTomo.pytorch.models_torch.UNet2D method) (nDTomo.pytorch.models_torch.UpBlock method) (nDTomo.pytorch.models_torch.VolumeModel method) (nDTomo.pytorch.reg_torch.NCC method) (nDTomo.pytorch.utils_torch.SSIM2D method) (nDTomo.pytorch.utils_torch.SSIM3DLoss method)

forward_project_3D() (in module nDTomo.pytorch.tomo_torch) forwardproject() (in module nDTomo.tomo.conv_tomo)

G

G() (in module nDTomo.analysis.peaks) Gaussian() (in module nDTomo.analysis.peaks) gaussian() (nDTomo.pytorch.utils_torch.SSIM2D static method) gaussian_peak() (in module nDTomo.pytorch.peak_models_torch) generate_indices() (in module nDTomo.pytorch.utils_torch)

generate_interlaced_angles() (in module nDTomo.sim.pencilbeam) generate_sobol_indices_batch() (in module nDTomo.pytorch.utils_torch) get_line_coordinates() (nDTomo.methods.hyperexpl.InteractiveHyperProfileExtraction method) (nDTomo.methods.hyperexpl.InteractiveProfileExtraction method) GetPeaksInfo() (in module nDTomo.analysis.peaks) gmodel() (nDTomo.gui.nDTomoGUI.FitData method), [1]

H

HyperSliceExplorer (class in nDTomo.methods.hyperexpl)

I

icp_torch() (in module nDTomo.pytorch.reg_torch) image (nDTomo.gui.nDTomoGUI.nDTomoGUI attribute), [1] image_segm() (in module nDTomo.methods.misc) ImageSpectrumFitGUI (class in nDTomo.methods.hyperexpl) ImageSpectrumGUI (class in nDTomo.methods.hyperexpl)

imrotate_torch() (in module nDTomo.pytorch.tomo_torch) init_console() (nDTomo.gui.nDTomoGUI.nDTomoGUI method), [1] initialize_counter() (in module nDTomo.pytorch.utils_torch) InteractiveHyperProfileExtraction (class in nDTomo.methods.hyperexpl) InteractiveProfileExtraction (class in nDTomo.methods.hyperexpl) interpvol() (in module nDTomo.methods.misc)

K

KeVtoAng() (in module nDTomo.methods.xrays)

L

L() (in module nDTomo.analysis.peaks) Linear() (in module nDTomo.analysis.peaks) lmodel() (nDTomo.gui.nDTomoGUI.FitData method), [1] load_example_patterns() (in module nDTomo.sim.phantoms)

load_example_xanes() (in module nDTomo.sim.phantoms) loadchemvol() (nDTomo.gui.nDTomoGUI.nDTomoGUI method), [1] loadpeakfits() (in module nDTomo.analysis.peaks) Lorentzian() (in module nDTomo.analysis.peaks) lorentzian_peak() (in module nDTomo.pytorch.peak_models_torch)

M

mae() (in module nDTomo.methods.metrics) mae_loss() (in module nDTomo.pytorch.reg_torch) main() (in module nDTomo.gui.nDTomoGUI) make_matrix_even() (in module nDTomo.methods.misc) mask (nDTomo.gui.nDTomoGUI.nDTomoGUI attribute), [1] mask_thr() (in module nDTomo.methods.misc) maskvolume() (in module nDTomo.methods.misc) module nDTomo.analysis.peaks nDTomo.gui.nDTomoGUI nDTomo.methods.hyperexpl nDTomo.methods.metrics nDTomo.methods.misc nDTomo.methods.noise nDTomo.methods.plots nDTomo.methods.xrays nDTomo.methods.zip nDTomo.pytorch.models_torch nDTomo.pytorch.peak_models_torch nDTomo.pytorch.reg_torch nDTomo.pytorch.tomo_torch nDTomo.pytorch.utils_torch nDTomo.sim.pencilbeam nDTomo.sim.phantoms nDTomo.sim.shapes2D nDTomo.sim.shapes3D nDTomo.sim.xrdct nDTomo.tomo.astra_tomo nDTomo.tomo.conv_tomo nDTomo.tomo.sinograms

mse() (in module nDTomo.methods.metrics) mse_loss() (in module nDTomo.pytorch.reg_torch)

N

nan_to_number() (in module nDTomo.methods.misc) NCC (class in nDTomo.pytorch.reg_torch) nDphantom_2Dmap() (in module nDTomo.sim.phantoms) nDphantom_5D() (in module nDTomo.sim.phantoms) nDTomo.analysis.peaks module nDTomo.gui.nDTomoGUI module nDTomo.methods.hyperexpl module nDTomo.methods.metrics module nDTomo.methods.misc module nDTomo.methods.noise module nDTomo.methods.plots module nDTomo.methods.xrays module nDTomo.methods.zip module nDTomo.pytorch.models_torch module nDTomo.pytorch.peak_models_torch module nDTomo.pytorch.reg_torch module nDTomo.pytorch.tomo_torch module

nDTomo.pytorch.utils_torch module nDTomo.sim.pencilbeam module nDTomo.sim.phantoms module nDTomo.sim.shapes2D module nDTomo.sim.shapes3D module nDTomo.sim.xrdct module nDTomo.tomo.astra_tomo module nDTomo.tomo.conv_tomo module nDTomo.tomo.sinograms module nDTomo_colormap() (in module nDTomo.methods.plots) nDTomoGUI (class in nDTomo.gui.nDTomoGUI), [1] ndtomopath() (in module nDTomo.methods.misc) nDTomophantom_2D() (in module nDTomo.sim.phantoms) nDTomophantom_3D() (in module nDTomo.sim.phantoms) nDTomophantom_4D() (in module nDTomo.sim.phantoms) nDVAcq (class in nDTomo.sim.xrdct) normalize_affine_matrix() (in module nDTomo.pytorch.reg_torch) normalized_cross_correlation() (in module nDTomo.methods.metrics) normvol() (in module nDTomo.methods.misc) number_to_nan() (in module nDTomo.methods.misc)

O

odd_idx() (in module nDTomo.methods.misc) on_canvas_scroll() (nDTomo.gui.nDTomoGUI.nDTomoGUI method), [1] on_motion() (nDTomo.methods.hyperexpl.InteractiveHyperProfileExtraction method) (nDTomo.methods.hyperexpl.InteractiveProfileExtraction method) on_press() (nDTomo.methods.hyperexpl.InteractiveHyperProfileExtraction method) (nDTomo.methods.hyperexpl.InteractiveProfileExtraction method)

onMapClick() (nDTomo.methods.hyperexpl.HyperSliceExplorer method) onMapMoveEvent() (nDTomo.methods.hyperexpl.HyperSliceExplorer method) onPlotClick() (nDTomo.methods.hyperexpl.HyperSliceExplorer method) onPlotMoveEvent() (nDTomo.methods.hyperexpl.HyperSliceExplorer method)

P

pad_zeros() (in module nDTomo.methods.misc) pad_zeros_svol() (in module nDTomo.methods.misc) pad_zeros_vol() (in module nDTomo.methods.misc) paralleltomo() (in module nDTomo.tomo.conv_tomo) PeakFitCNN (class in nDTomo.pytorch.models_torch) PeakModel (class in nDTomo.pytorch.models_torch) peaktype (nDTomo.gui.nDTomoGUI.nDTomoGUI attribute), [1] pearson7_peak() (in module nDTomo.pytorch.peak_models_torch) phantom_comp_im() (in module nDTomo.sim.phantoms) phantom_random_shapes() (in module nDTomo.sim.phantoms) plot_fit_results() (nDTomo.gui.nDTomoGUI.nDTomoGUI method), [1] plot_intensity_profile() (nDTomo.methods.hyperexpl.InteractiveHyperProfileExtraction method) (nDTomo.methods.hyperexpl.InteractiveProfileExtraction method) plot_mean_image() (nDTomo.gui.nDTomoGUI.nDTomoGUI method), [1] plot_mean_image_linear_bkg() (nDTomo.gui.nDTomoGUI.nDTomoGUI method), [1]

plot_mean_image_mean_bkg() (nDTomo.gui.nDTomoGUI.nDTomoGUI method), [1] plot_roi_pattern() (nDTomo.gui.nDTomoGUI.nDTomoGUI method), [1] plotfigs_imgs() (in module nDTomo.methods.plots) plotfigs_spectra() (in module nDTomo.methods.plots) pol2cart() (in module nDTomo.methods.misc) pol2cartim() (in module nDTomo.methods.misc) polynomial() (in module nDTomo.pytorch.peak_models_torch) PrmCNN2D (class in nDTomo.pytorch.models_torch) profile_function() (nDTomo.gui.nDTomoGUI.nDTomoGUI method), [1] progress_fit (nDTomo.gui.nDTomoGUI.FitData attribute), [1] pseudo_voigt_peak() (in module nDTomo.pytorch.peak_models_torch) pseudo_voigt_peak_t() (in module nDTomo.pytorch.peak_models_torch) psnr() (in module nDTomo.methods.metrics) pvmodel() (nDTomo.gui.nDTomoGUI.FitData method), [1] PVoigt() (in module nDTomo.analysis.peaks)

Q

q2tth() (in module nDTomo.methods.xrays)

Quadratic() (in module nDTomo.analysis.peaks)

R

radiographs_mu() (in module nDTomo.tomo.astra_tomo) radonvol() (in module nDTomo.tomo.conv_tomo) readponi() (nDTomo.sim.xrdct.nDVAcq method) readscanprms() (nDTomo.sim.xrdct.nDVAcq method) rebin1d() (in module nDTomo.methods.misc) rebinmat() (in module nDTomo.methods.misc) register_affine_2d() (in module nDTomo.pytorch.reg_torch) register_affine_3d() (in module nDTomo.pytorch.reg_torch) request_stop() (nDTomo.gui.nDTomoGUI.FitData method), [1] res (nDTomo.gui.nDTomoGUI.nDTomoGUI attribute), [1]

ResNet2D (class in nDTomo.pytorch.models_torch) ResNetBlock (class in nDTomo.pytorch.models_torch) result_partial (nDTomo.gui.nDTomoGUI.FitData attribute), [1] Rexp() (in module nDTomo.methods.metrics) rgb2gray() (in module nDTomo.methods.misc) ring_remover_post_recon_stripe() (in module nDTomo.tomo.sinograms) RotMat() (in module nDTomo.pytorch.tomo_torch) run() (nDTomo.gui.nDTomoGUI.FitData method), [1] (nDTomo.sim.xrdct.nDVAcq method) Rwp() (in module nDTomo.methods.metrics)

S

savechemvol() (nDTomo.gui.nDTomoGUI.nDTomoGUI method), [1] savefitresults() (nDTomo.gui.nDTomoGUI.nDTomoGUI method), [1] savepeakfits() (in module nDTomo.analysis.peaks) saveprms() (nDTomo.sim.xrdct.nDVAcq method) scalesinos() (in module nDTomo.tomo.sinograms) SD2I (class in nDTomo.pytorch.models_torch) segment_image() (nDTomo.gui.nDTomoGUI.nDTomoGUI method), [1] selXRDCTdata() (nDTomo.gui.nDTomoGUI.nDTomoGUI method), [1] set_fit_range() (nDTomo.gui.nDTomoGUI.nDTomoGUI method), [1] set_thr() (nDTomo.gui.nDTomoGUI.nDTomoGUI method), [1] setdata() (nDTomo.sim.xrdct.nDVAcq method) setdetector() (nDTomo.sim.xrdct.nDVAcq method) setdirs() (nDTomo.sim.xrdct.nDVAcq method) setscanprms() (nDTomo.sim.xrdct.nDVAcq method) setwvl() (nDTomo.sim.xrdct.nDVAcq method) setxrdprms() (nDTomo.sim.xrdct.nDVAcq method) seven_zip_file() (in module nDTomo.methods.zip) seven_zip_folder() (in module nDTomo.methods.zip) seven_zip_folder_split() (in module nDTomo.methods.zip) SheppLogan() (in module nDTomo.sim.phantoms) show_intensity_profile() (nDTomo.methods.hyperexpl.InteractiveHyperProfileExtraction method) (nDTomo.methods.hyperexpl.InteractiveProfileExtraction method) show_spectral_profile() (nDTomo.methods.hyperexpl.InteractiveHyperProfileExtraction method)

showim() (in module nDTomo.methods.plots) showplot() (in module nDTomo.methods.plots) showspectra() (in module nDTomo.methods.plots) simulate_synchrotron_intensity() (in module nDTomo.methods.xrays) Sino_torch() (in module nDTomo.pytorch.tomo_torch) sinocentering() (in module nDTomo.tomo.sinograms) sinocomcor() (in module nDTomo.tomo.sinograms) sirt() (in module nDTomo.tomo.conv_tomo) sirt_functional() (in module nDTomo.tomo.conv_tomo) sirt_pytorch_functional() (in module nDTomo.pytorch.tomo_torch) spectrum (nDTomo.gui.nDTomoGUI.nDTomoGUI attribute), [1] split_pearson_peak() (in module nDTomo.pytorch.peak_models_torch) SSIM2D (class in nDTomo.pytorch.utils_torch) SSIM3DLoss (class in nDTomo.pytorch.utils_torch) ssim_data() (in module nDTomo.methods.metrics) ssquares() (in module nDTomo.sim.phantoms) sstar() (in module nDTomo.sim.phantoms) start_scan() (nDTomo.sim.xrdct.nDVAcq method) stop_console() (nDTomo.gui.nDTomoGUI.nDTomoGUI method), [1] stopfit() (nDTomo.gui.nDTomoGUI.nDTomoGUI method), [1] subtract_linear_background() (in module nDTomo.analysis.peaks) suggest_peak_positions() (nDTomo.gui.nDTomoGUI.nDTomoGUI method), [1] sync_peak_position_from_roi() (nDTomo.gui.nDTomoGUI.nDTomoGUI method), [1]

T

tand() (in module nDTomo.analysis.peaks) to_tensor2d() (in module nDTomo.pytorch.reg_torch) to_tensor3d() (in module nDTomo.pytorch.reg_torch) toggle_real_time() (nDTomo.methods.hyperexpl.chemimexplorer method) (nDTomo.methods.hyperexpl.ImageSpectrumFitGUI method) (nDTomo.methods.hyperexpl.ImageSpectrumGUI method) toggle_real_time_image() (nDTomo.gui.nDTomoGUI.nDTomoGUI method), [1] toggle_real_time_spectrum() (nDTomo.gui.nDTomoGUI.nDTomoGUI method), [1] total_variation_image() (in module nDTomo.methods.metrics)

total_variation_volume() (in module nDTomo.methods.metrics) translate_image() (in module nDTomo.sim.pencilbeam) translate_xy() (in module nDTomo.methods.misc) tri() (in module nDTomo.sim.phantoms) tth2q() (in module nDTomo.methods.xrays) tv_3d() (in module nDTomo.pytorch.utils_torch) tv_3d_spectral() (in module nDTomo.pytorch.utils_torch) tv_spatial() (in module nDTomo.pytorch.utils_torch) tv_spectral() (in module nDTomo.pytorch.utils_torch)

U

UNet2D (class in nDTomo.pytorch.models_torch) UpBlock (class in nDTomo.pytorch.models_torch) update() (nDTomo.methods.hyperexpl.HyperSliceExplorer method) update_counter() (in module nDTomo.pytorch.utils_torch) update_image() (nDTomo.gui.nDTomoGUI.nDTomoGUI method), [1]

update_live_fit_image() (nDTomo.gui.nDTomoGUI.nDTomoGUI method), [1] update_plots() (nDTomo.methods.hyperexpl.chemimexplorer method) (nDTomo.methods.hyperexpl.ImageSpectrumFitGUI method) (nDTomo.methods.hyperexpl.ImageSpectrumGUI method) update_spectrum() (nDTomo.gui.nDTomoGUI.nDTomoGUI method), [1] updatefitdata() (nDTomo.gui.nDTomoGUI.nDTomoGUI method), [1]

V

valid_fit_for_pixel() (nDTomo.gui.nDTomoGUI.nDTomoGUI method), [1] voigt_peak() (in module nDTomo.pytorch.peak_models_torch)

volume (nDTomo.gui.nDTomoGUI.nDTomoGUI attribute), [1] VolumeModel (class in nDTomo.pytorch.models_torch)

W

warp_volume_xy_batched() (in module nDTomo.pytorch.reg_torch) write_cbf() (nDTomo.sim.xrdct.nDVAcq method) write_edf() (nDTomo.sim.xrdct.nDVAcq method)

write_frame() (nDTomo.sim.xrdct.nDVAcq method) write_h5() (nDTomo.sim.xrdct.nDVAcq method) write_tiff() (nDTomo.sim.xrdct.nDVAcq method)

X

xaxis (nDTomo.gui.nDTomoGUI.nDTomoGUI attribute), [1]

xaxislabel (nDTomo.gui.nDTomoGUI.nDTomoGUI attribute), [1]

Z

zigzag_cols() (in module nDTomo.tomo.sinograms) zigzag_fast_rotation() (in module nDTomo.sim.pencilbeam) zigzag_fast_translation() (in module nDTomo.sim.pencilbeam) zigzag_rows() (in module nDTomo.tomo.sinograms) zigzag_stepped_rotation() (in module nDTomo.sim.pencilbeam) zigzag_stepped_translation() (in module nDTomo.sim.pencilbeam) zigzig_fast_rotation() (in module nDTomo.sim.pencilbeam) zigzig_fast_translation() (in module nDTomo.sim.pencilbeam)

zigzig_stepped_rotation() (in module nDTomo.sim.pencilbeam) zigzig_stepped_translation() (in module nDTomo.sim.pencilbeam) zigzig_stepped_translation_optimised() (in module nDTomo.sim.pencilbeam) zip_all_files_with_extension() (in module nDTomo.methods.zip) zip_by_extension() (in module nDTomo.methods.zip) zip_each_file_with_extension() (in module nDTomo.methods.zip) zip_file_list() (in module nDTomo.methods.zip) zip_with_7z() (in module nDTomo.methods.zip)